Insertion junction: CLIP2.045176_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045176
Chromosome:chromosome 3
Location:4044336
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g171900 FAP56 Flagellar Associated Protein 56 3'UTR
Cre03.g171950 PPC2,PEPC2 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc); Phosphoenolpyruvate carboxylase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATATTAATACCCTCTGCACCTTTGGCGCCCCACTGCCCCGGCGCCGCG
Internal bar code:GCTAACGACGCTTGTCGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGGGATGAAGACAAGAA
Suggested primer 2:CCACTTCCTGTTTGTGTGCG