Insertion junction: CLIP2.045178_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045178
Chromosome:chromosome 17
Location:4893823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATGCGAAGCGGGCGCTCTACCAATTGAGCTACGACCCCAGGGCACCC
Internal bar code:CTCCATTAGGCCAGTGAATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:76.7442
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAGGTCAGGCAGGATTT
Suggested primer 2:GAACGTTTTGTCGTGTGGGG