Insertion junction: CLIP2.045185_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045185
Chromosome:chromosome 7
Location:3528788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAATCAGAGGGAAAGGGACAGGCTAAGACCGTGTACCGGTAGTATTA
Internal bar code:AGCGTTGGGTCGGAGAGCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4987
LEAP-Seq percent confirming:65.9091
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGTGAAGTACGGCAGT
Suggested primer 2:GCGTTACGTGTTGGCAGTTT