Insertion junction: CLIP2.045186_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045186
Chromosome:chromosome 3
Location:9055940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202337 MOT28 (1 of 2) PF14753 - Domain of unknown function (DUF4475) (DUF4475); Predicted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGCCGTCAAGAACGCTCGCGTGAGTGGAGCGACTCTGGTAGTAGCAG
Internal bar code:GTATCGCTTCGCGAATCTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1513
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATCGTTGAGGAAGCCA
Suggested primer 2:GACCTGTGAGAGCTCGTTCC