Insertion junction: CLIP2.045188_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045188
Chromosome:chromosome 7
Location:1225845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321550 BLZ5,SOR1 bZIP transcription factor; (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGATGAACTGGCGGAGCTGCTTCAGATGGATCTGGCTCCCAATGGCG
Internal bar code:AAACTGTGTCGGGTGCGGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCAGGCCAGCTTAAGA
Suggested primer 2:GCGTCAATTGTGCGTCAACT