Insertion junction: CLIP2.045190_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045190
Chromosome:chromosome 6
Location:8360675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307650 (1 of 1) PF12138 - Spherulation-specific family 4 (Spherulin4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAAGACCCAGAAGCAGCCCACAGAGCGCGGAGGAGGTTGGGCCTGGT
Internal bar code:GCAATCCATCAGTACGTCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:337
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACTGCGCATACCGGTAT
Suggested primer 2:GGACAAAGCTCGGGTCTTCA