Insertion junction: CLIP2.045191_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045191
Chromosome:chromosome 9
Location:2596185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392400 SEC24C (1 of 15) IPR011053 - Single hybrid motif; COP-II coat subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCACGCCCGCAGACGTCCCTGCCGCTGCCGCGTCTCCGCCGGCCTCC
Internal bar code:CATGTGCGCGGCATGTTCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1050
LEAP-Seq percent confirming:52.2388
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACAAAGTACCTGCGGCT
Suggested primer 2:AGCGATGGGGGTTCTTGAAG