Insertion junction: CLIP2.045202_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045202
Chromosome:chromosome 12
Location:5130691
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g801426 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGTCGGTTGCCGCACGCGGCACCCCTCCCTTCCTGCTCCTTCCTCCC
Internal bar code:TAATGGGCCGCATATATTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5050
LEAP-Seq percent confirming:5.92593
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:127
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCTGCATGCTAGGAGAG
Suggested primer 2:TGCAGCACGTGTAGGTTCAT