Insertion junction: CLIP2.045208_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045208
Chromosome:chromosome 16
Location:3766486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685217 NUP58 Nucleoporin 58; (1 of 1) K14307 - nucleoporin p58/p45 (NUPL1, NUP49) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTGTAGGGTGAAGGCTGGAGGGTGTGGGAGGGTGTGGGAGGGTGGG
Internal bar code:AGAACGGTCCAAGGCGCATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTACCCCTGTCAGGCAT
Suggested primer 2:CACTGATCTCCCACCCCAAC