Insertion junction: CLIP2.045216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045216
Chromosome:chromosome 2
Location:6641572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389901 intron
lncRNA_TCONS_00129454 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGACCCAACCCTGCCATCCCAAACCCTGACGACCCAACCCTGACGAC
Internal bar code:CATATTCACGTGCGCATGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCGACACACAGCTATC
Suggested primer 2:CGCACCAAGTGTAGGAGTGT