Insertion junction: CLIP2.045226_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045226
Chromosome:chromosome 12
Location:3093535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501050 ALDH25,ALD6 Aldehyde/histidinol dehydrogenase; (1 of 1) 1.1.1.1//1.2.1.10 - Alcohol dehydrogenase / Aldehyde reductase // Acetaldehyde dehydrogenase (acetylating) / Aldehyde dehydrogenase (acylating) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGTCCCTCTCCCTTTGCCCCCTCTCCCCCCCCCCCCGGCACGTACCC
Internal bar code:ATATCGGATCAACTTGGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGAGGAGTTGGGAATG
Suggested primer 2:CACACTCCACAGACTCCACC