Insertion junction: CLIP2.045227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045227
Chromosome:chromosome 16
Location:6954285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672049 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGTGGGACCTCTCCGCCGGCGCAGACACCAGCAGCGGCAGCGCAGG
Internal bar code:TACAGAGTAACCATTGGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1973
LEAP-Seq percent confirming:43.3333
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGAGGAGCAGTGCAAT
Suggested primer 2:CGCTTCTTGTCCTGGAACCT