Insertion junction: CLIP2.045239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045239
Chromosome:chromosome 7
Location:1531925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324500 MMP22 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCTCTTCCACGTTACAGGTCCATCAAGCGGTCTATACGTAGCATTA
Internal bar code:GCCACGAAAAACGTTATTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2382
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGGAGGTGGCAGTTGAG
Suggested primer 2:CGCTTGCTCGTTCGTGAAAA