Insertion junction: CLIP2.045248_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045248
Chromosome:chromosome 10
Location:1258277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801114 (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCCTCCCTCGCCCAAGCCACCCAGCCCACCGCCCAGCCCCGCTCCTC
Internal bar code:GTGACGGACTGGCATGTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2070
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCAGCGGTGGAACTCAG
Suggested primer 2:ATTCACAGGGGAAGAGACGC