Insertion junction: CLIP2.045250_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045250
Chromosome:chromosome 11
Location:3537553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477800 HDA10 (1 of 1) PTHR10625//PTHR10625:SF119 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATGCCGGATGCACAGCAACAGAAAAAAGAAAACAATGAAGCAGGGC
Internal bar code:GTAAAGTGGAGACTAGGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1275
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCAAGGGCAGCTACGAC
Suggested primer 2:CACCAAGCAACACAGCACTC