Insertion junction: CLIP2.045256_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045256
Chromosome:chromosome 8
Location:338282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358573 MLO3 transient receptor potential ion channel protein; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGACACGTCGGCCCAAAAGTGCGCGGCGGACTGGCATCGCGCCCTGC
Internal bar code:AGATTTCGTCATGAAACGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTCTGATGTCCCCCAC
Suggested primer 2:ACCCATTGTACAAGCAGGGG