Insertion junction: CLIP2.045257_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045257
Chromosome:chromosome 5
Location:3157472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232002 ACX2 Acyl-CoA oxidase/dehydrogenase; (1 of 2) PTHR10909//PTHR10909:SF317 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 2, PEROXISOMAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCCCTGCACGCGACCCCGCAATCCCCTGGAAGCTGCAAACCCCCA
Internal bar code:CGGCACAAGGGGGTTATTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCGAGACCCTCACAGT
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT