Insertion junction: CLIP2.045259_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045259
Chromosome:chromosome 17
Location:792266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701450 (1 of 12) PTHR13078:SF22 - MAOC-LIKE DEHYDRATASE DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAATCGTAGTCGTCGTACCCCCCCTCGCGCCCACCGCCGTCGTCAAGCT
Internal bar code:TATTTTATGTGTCCATTTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:19.0476
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTGACGCGGATTGGGAT
Suggested primer 2:ACTGTGGGAAGCCATTGAGG