Insertion junction: CLIP2.045267_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045267
Chromosome:chromosome 9
Location:5279973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407200 POD1 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAAGCATTGGGTGGGTGTGGAGGGTAGCCATTCATGCGATCGGTGTAT
Internal bar code:CTTCTCTTTCCTTTTTTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGGGATGGGAAATTCGG
Suggested primer 2:TACAGGCTACAGGGCAAAGC