Insertion junction: CLIP2.045267_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045267
Chromosome:chromosome 9
Location:5279976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407200 POD1 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACCCCCCGCCTCCCACCCCCCAATGCCGTACAGAACGTGATCATCG
Internal bar code:CTTCTCTTTCCTTTTTTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGCTACAGGGCAAAGC
Suggested primer 2:TTGGGGGATGGGAAATTCGG