Insertion junction: CLIP2.045271_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045271
Chromosome:chromosome 6
Location:6398447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTTGCTTGAGTGTGCGTGTGTGTATAACTGTGTGCGTGCGGGTGTG
Internal bar code:GTCGACGGTCACTTGAGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:60.5263
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTACGTACACACCTGCT
Suggested primer 2:CCACCCCGCATCCTACATAC