Insertion junction: CLIP2.045274_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045274
Chromosome:chromosome 5
Location:829183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246050 OTU3 (1 of 1) K13717 - OTU domain-containing protein 3 [EC:3.4.19.12] (OTUD3); OTU-like cysteine protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCATGGCAGACCACGAGGAGGAGTTCGCGCCGTTCGTGGAGGACGAC
Internal bar code:CCATGGCAGTGCGATCAAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGTTGGGGGAGTGAAGG
Suggested primer 2:CTGGTGATGCGCATGACATG