Insertion junction: CLIP2.045286_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045286
Chromosome:chromosome 11
Location:495031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467593 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTGCATCATCCGCATCGGTGGCCAGACCTTCCGCACGCGCACGGCCG
Internal bar code:CGGGCTGGGCAGTAAAACCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2151
LEAP-Seq percent confirming:65.4867
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTGCCGATAGATCCCCC
Suggested primer 2:GCAAACGGCGTTGTTGTAGT