Insertion junction: CLIP2.045293_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045293
Chromosome:chromosome 9
Location:892840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403350 (1 of 1) IPR000357//IPR016024//IPR021133 - HEAT repeat // Armadillo-type fold // HEAT, type 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGGGGTCCGTGGCATTGTCTGCCTAACAACCTGTCGGCCTGTTTCTT
Internal bar code:TAGAAGACCCGGGTATCTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4350
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCCACGTGGTGTACAG
Suggested primer 2:TCGTTGGTACACACAGCCTC