Insertion junction: CLIP2.045297_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045297
Chromosome:chromosome 1
Location:1752986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009700 PPP1 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAGCTCACGGCGCTGGGCGTCGCTGCTGTTGACCATGACGGCATCC
Internal bar code:CACCGGCAGGCGAGGCCGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3326
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAGCACAGCATGACAG
Suggested primer 2:TATAATACACCCCGCACGCC