Insertion junction: CLIP2.045304_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045304
Chromosome:chromosome 7
Location:1697738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) outside_mRNA
Cre07.g800783 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCTGTGCGCGTTGCCGCAAGCTACCACCACACCCGCCGTGCTCCACC
Internal bar code:CAGTTATCATTGATCGCTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4350
LEAP-Seq percent confirming:95.5056
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TATACCCCGGACTCAGCACA
Suggested primer 2:TTTGGCAGGAGGTAAGCTGG