Insertion junction: CLIP2.045312_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045312
Chromosome:chromosome 4
Location:1909454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGGGGGGCAGTGGGCGGCAGTGGGTTGGCGGGGTGAGGGCGAGAGAG
Internal bar code:TAGGTGCGATTGCTGATTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:957
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACCATCATCACCGCCCAAT
Suggested primer 2:TTGCTGTGATAATGCGCACG