Insertion junction: CLIP2.045317_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045317
Chromosome:chromosome 17
Location:3528031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724550 DIP13,NA14 Deflagellation Inducible Protein 13; (1 of 1) K16780 - sjoegren syndrome nuclear autoantigen 1 (SSNA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTTTCCCAACACCCCTTAACGTTGCCTTGCACGGTGCTGGCGACGC
Internal bar code:TTCAAGAGGCAAGGACGACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5000
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGGTGCTTTCCTGCTA
Suggested primer 2:GATGACGCGGAGAAGGCTAA