Insertion junction: CLIP2.045335_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045335
Chromosome:chromosome 10
Location:5506311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAAGGTGCTGGCGCACCTGCGGCAACTGCCTGATGGCGCCCACCTCC
Internal bar code:TAGCTGGTCGCCCTCGGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGAGGCGCTATGGATG
Suggested primer 2:AACGCATACTCGCACCTTGA