Insertion junction: CLIP2.045340_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045340
Chromosome:chromosome 1
Location:2518659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014850 (1 of 1) PTHR12281//PTHR12281:SF2 - RP42 RELATED // DCN1-LIKE PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGTGGAGCACATGCGGGAAAAGCGGGCTGTGGGCACTTCAACCTAA
Internal bar code:GACACGGTCTAGTCAGCTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4602
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGACTGTCCTCGCAAA
Suggested primer 2:TTCGCAGAAGGGCCAGAAAT