Insertion junction: CLIP2.045341_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045341
Chromosome:chromosome 16
Location:6595132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673950 (1 of 1) 2.6.1.80 - Nicotianamine aminotransferase / Nicotianamine transaminase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGTGGGCTGTGTGTGTGGGTGAAGGGGACGGGATGGTCACAACGGG
Internal bar code:CTGGAGTTAGGGATGTGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGCTGAGATGCTTCCC
Suggested primer 2:GTAGGTAGGGTGCGACATGG