Insertion junction: CLIP2.045343_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045343
Chromosome:chromosome 8
Location:3634361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379800 (1 of 1) PF00207//PF07974 - Alpha-2-macroglobulin family (A2M) // EGF-like domain (EGF_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGATCCAGGCGGGGGCGGCTGGCGTTCTTCCCATTGGCGCCAATCAAC
Internal bar code:GCCCTCCTGCCCGAATCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1553
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCCTACACCATCACCTT
Suggested primer 2:GACAGCAGACCGGGTACAAA