Insertion junction: CLIP2.045344_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045344
Chromosome:chromosome 4
Location:3916059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230830 (1 of 1) IPR000104//IPR001012//IPR029071 - Antifreeze protein, type I // UBX domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGAGCGGGCAAGGGCCGCGGGCGGCACACGGCCGGGATTGGGCGCC
Internal bar code:CTGTTCGTTTATGCCATACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1311
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGGTAGGGTCACACAG
Suggested primer 2:CGAGCAACCACATGACCTCT