Insertion junction: CLIP2.045349_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045349
Chromosome:chromosome 3
Location:5645618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186250 (1 of 1) PTHR22935//PTHR22935:SF77 - PENICILLIN-BINDING PROTEIN // BETA-LACTAMASE FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGGCAGCGGCGGCGGCGTTGTCATCGTAGTCCGCCGGCCAGGGCTGC
Internal bar code:TGAACTTTGAGGCAAGGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2016
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGCAATCACTGTAATGG
Suggested primer 2:ATTGTCGTAACCCGCAGTGT