Insertion junction: CLIP2.045357_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045357
Chromosome:chromosome 4
Location:1289633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214690 (1 of 1) PTHR22731:SF3 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 5'UTR
Cre04.g214700 (1 of 4) PTHR12406//PTHR12406:SF27 - CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCGCTTGCGCAAGCATTAATTCGGCTTCACAATCAGTTTCAGAGTTC
Internal bar code:CTTAGCCGTATAACGGCGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1627
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAATTACAACCCCGCCC
Suggested primer 2:ACGTCGGCACTTCACTTCAT