Insertion junction: CLIP2.045360_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045360
Chromosome:chromosome 12
Location:8175679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551950 LTD,CGL38,LTD1 Homolog to LHCP translocon defect protein LTD; (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGTCATAGGTGCCCTCCGTGGCCAGGAAGCCCATATAGTTGAAGTA
Internal bar code:GGCGTGAAAAATTATGCTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCATACCAAAGCCCGGAA
Suggested primer 2:CTGACACTGGTCCTGACACC