Insertion junction: CLIP2.045362_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045362
Chromosome:chromosome 11
Location:3240537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476200 NZF1 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH); CCCH-type zinc finger protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCTTGCTGACCGGCGCCCATCTGCCCCTGGCCCTGGCCCATCTGGC
Internal bar code:GTACGACATATGCCTCGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3969
LEAP-Seq percent confirming:99.0385
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGCTTTCGCAGCTTTT
Suggested primer 2:GACGAGGTGTTGAGGGAAGG