Insertion junction: CLIP2.045365_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045365
Chromosome:chromosome 10
Location:5024681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454650 RPC5 (1 of 1) K14721 - DNA-directed RNA polymerase III subunit RPC5 (RPC5, POLR3E); DNA-directed RNA polymerase III, 8 kD CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATTGTGCCGCCGCCCAGCGTCACCGCCTCCAACCCCCACGGCGCCGG
Internal bar code:GACTTTAAAGCCGACTAATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1759
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGTGCATGGATTTTAGG
Suggested primer 2:TGGAGCCCATGGACATTGAC