Insertion junction: CLIP2.045368_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045368
Chromosome:chromosome 3
Location:2824370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162000 TPT8,TPT7 UMAMIT (Usually Multiple Acids Move In and Out Transporters) type transporter; (1 of 5) PTHR11132//PTHR11132:SF101 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGAGCAGCGGCAGGAGTCCGGGCTGAACTCGGTTGTGGCACGGGGGC
Internal bar code:TTGACGTGGAGTTTTAACCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTGGATTGGGGAATGG
Suggested primer 2:GTAGTAGAGCGTGGTGACGG