Insertion junction: CLIP2.045382_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045382
Chromosome:chromosome 9
Location:1418693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGAGCAGAGGGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGTCATG
Internal bar code:TGCGGTAGGTGTTTTACCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1452
LEAP-Seq percent confirming:79.3103
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAACAACACGACACCAC
Suggested primer 2:AGGGAGGGAGGAGACATGTC