Insertion junction: CLIP2.045391_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045391
Chromosome:chromosome 16
Location:1626103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654250 THB6 Truncated hemoglobin; (1 of 2) PTHR10681:SF17 - PEROXIREDOXIN-6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCAGCGCTGACACCACCGCCACTTGTGCCGTTGCAGGCCTGGCGAGG
Internal bar code:GCCTCTGGGGAGCTTGAGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCCCTTCCTTCCCTTTC
Suggested primer 2:CGTCATGTAAGCGCACGAAG