Insertion junction: CLIP2.045395_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045395
Chromosome:chromosome 13
Location:4907405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605386 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACCAGAGGGGATTTAGGGGGTGTACGGCACGGTACGGCACCGTCGG
Internal bar code:AATAGGTGTTGTTACGGGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4389
LEAP-Seq percent confirming:72.3404
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGATCGATAGGGTGCAG
Suggested primer 2:AGTGCTGGTACAAGTACGGC