Insertion junction: CLIP2.045396_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045396
Chromosome:chromosome 1
Location:2336256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013050 (1 of 2) IPR006652//IPR011043 - Kelch repeat type 1 // Galactose oxidase/kelch, beta-propeller intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACGCTGAGTGGGAGTTAGAGAGGAAGGCGGGACGGGCAAAGACCGTG
Internal bar code:GTCATGGAGTTTAAACCCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5189
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGTGAAGTACGGCAGT
Suggested primer 2:CCGTGTGTGTCATGTCCTGA