Insertion junction: CLIP2.045399_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045399
Chromosome:chromosome 16
Location:4613505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670850 (1 of 1) PTHR22975:SF2 - ECHINUS SPLICE FORM 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTTTGGAACCCCCAGGGAGGTGCACCGCAGTGCGGTCGGGTCTCAAG
Internal bar code:TACTTTTAACGGAAAGAATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTCCCAAGCCTACCAT
Suggested primer 2:TGTGGACGAAGAAGACGAGC