Insertion junction: CLIP2.045399_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045399
Chromosome:chromosome 16
Location:4613515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670850 (1 of 1) PTHR22975:SF2 - ECHINUS SPLICE FORM 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATACTGATGCGCCGGTCCGCCTCGACACGCCCACCGCACTCACGCAC
Internal bar code:TACTTTTAACGGAAAGAATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGACGAAGAAGACGAGC
Suggested primer 2:CCGTTTCCCAAGCCTACCAT