Insertion junction: CLIP2.045405_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045405
Chromosome:chromosome 1
Location:6541496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g046237 GEX33 (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCCGCGGCCTCAGCTGCCGCCACCTCCACCTCCACCTCCACCTCCA
Internal bar code:CGCCTTAGTTACAAATCGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1325
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACACTGTTGCAGTTGGC
Suggested primer 2:TGCTGATGTTGTTGCTGCTG