Insertion junction: CLIP2.045406_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045406
Chromosome:chromosome 14
Location:576538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611700 PLAP8,PLP8 Plastid lipid associated protein 8; (1 of 1) PF01476//PF04755 - LysM domain (LysM) // PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCTGGGATTGGAGTAAACTACCCCCTCCGCCAACCAACGCCTTTGCC
Internal bar code:ACAACGGTCCATGCGTTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2737
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCAGTCCGTGTTCAGCA
Suggested primer 2:GATGAATGTGTCCAGGCCCA