Insertion junction: CLIP2.045416_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045416
Chromosome:chromosome 10
Location:1968598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432000 DDB1 (1 of 1) K10610 - DNA damage-binding protein 1 (DDB1); UV-damaged DNA binding complex subunit 1 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGGAGGCCCAGTCAGGCGCAACCGGCGCGGATGGGGATGCGGAACCG
Internal bar code:TCTTAGGGCCCGTTTCGTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGGCACGCAGTTTAT
Suggested primer 2:TCCCCCTTTCCAACACAACC