Insertion junction: CLIP2.045420_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045420
Chromosome:chromosome 16
Location:7030853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674065 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCGGGCAGCGCTCCACCTCGGGAGCCATGTAGCCCTCCGTGCCGGC
Internal bar code:GTTCTAACTTACGCGTCAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2061
LEAP-Seq percent confirming:82.6923
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCTTCACTCCGGCATT
Suggested primer 2:CCGCCAAAACCAGCAATTCA