Insertion junction: CLIP2.045421_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045421
Chromosome:chromosome 6
Location:8421571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308200 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCTGCATGCCACACCCAGCAATCGTCCTTACGGCACTGCACCCTCCC
Internal bar code:TAAAGTATCCATTGGGTCCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4380
LEAP-Seq percent confirming:97.5904
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAATGCACTGCCCCTACA
Suggested primer 2:TCTTCAGGTGTTACCCGTGC